Initial commit of WQ_GUI
This commit is contained in:
458
src/utils/kriging.py
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458
src/utils/kriging.py
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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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"""
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克里金插值模块
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提供基于PyKrige的普通克里金插值功能，用于将离散的水质参数预测点
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插值为连续的栅格图像。
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主要功能：
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1. 普通克里金插值
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2. 多种变差函数模型支持
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3. 自动参数优化
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4. 栅格输出功能
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"""
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import numpy as np
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from osgeo import gdal
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import time
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import os
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import glob
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from pathlib import Path
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from typing import Optional, Tuple, Union, List
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import warnings
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warnings.filterwarnings('ignore')
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# 导入util模块的timeit装饰器
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try:
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from src.utils.util import timeit
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except ImportError:
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# 如果导入失败，定义一个简单的timeit装饰器
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def timeit(f):
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def wrapper(*args, **kwargs):
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start = time.time()
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ret = f(*args, **kwargs)
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print(f"{f.__name__} run time: {round(time.time() - start, 2)} s.")
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return ret
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return wrapper
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class KrigingInterpolator:
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"""克里金插值器类"""
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def __init__(self, variogram_models: Optional[List[str]] = None):
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"""
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初始化克里金插值器
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Args:
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variogram_models: 变差函数模型列表，默认为['spherical', 'exponential', 'gaussian', 'linear']
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"""
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self.variogram_models = variogram_models or ['spherical', 'exponential', 'gaussian', 'linear']
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self.last_used_model = None
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def validate_input_data(self, x: np.ndarray, y: np.ndarray, z: np.ndarray) -> Tuple[np.ndarray, np.ndarray, np.ndarray, bool]:
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"""
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验证和预处理输入数据
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Args:
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x: X坐标数组
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y: Y坐标数组
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z: 观测值数组
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Returns:
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处理后的x, y, z数组和是否有效的标志
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"""
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# 确保输入为numpy数组
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x = np.asarray(x)
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y = np.asarray(y)
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z = np.asarray(z)
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# 检查数组长度一致性
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if not (len(x) == len(y) == len(z)):
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raise ValueError(f"输入数组长度不一致: x={len(x)}, y={len(y)}, z={len(z)}")
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# 移除NaN值
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mask = ~(np.isnan(x) | np.isnan(y) | np.isnan(z))
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x = x[mask]
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y = y[mask]
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z = z[mask]
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# 检查数据点数量
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if len(x) < 3:
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print(f"警告：有效数据点不足（{len(x)}个），至少需要3个点进行Kriging插值")
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return x, y, z, False
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# 检查是否所有点重合
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if np.all(x == x[0]) and np.all(y == y[0]):
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print(f"警告：所有数据点位置相同（{x[0]}, {y[0]}），无法进行空间插值")
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return x, y, z, False
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# 检查z值是否有变化
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if np.all(z == z[0]):
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print(f"警告：所有观测值相同（{z[0]}），插值结果将为常数")
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return x, y, z, True
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def create_interpolation_grid(self, x: np.ndarray, y: np.ndarray, spatial_resolution: float) -> Tuple[np.ndarray, np.ndarray, int, int]:
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"""
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创建插值网格
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Args:
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x: X坐标数组
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y: Y坐标数组
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spatial_resolution: 空间分辨率
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Returns:
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网格x, 网格y, x方向步数, y方向步数
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"""
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# 计算空间范围，添加小的缓冲区
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x_min, x_max = x.min(), x.max()
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y_min, y_max = y.min(), y.max()
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# 添加缓冲区以确保所有点都在网格内
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buffer = spatial_resolution * 0.5
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x_min -= buffer
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x_max += buffer
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y_min -= buffer
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y_max += buffer
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# 计算网格步数
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step_x = int(np.ceil((x_max - x_min) / spatial_resolution)) + 1
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step_y = int(np.ceil((y_max - y_min) / spatial_resolution)) + 1
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# 限制网格大小以避免内存问题
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max_grid_size = 10000
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if step_x > max_grid_size or step_y > max_grid_size:
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print(f"警告：网格尺寸过大 ({step_x}x{step_y})，将调整空间分辨率")
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# 重新计算合适的分辨率
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new_resolution_x = (x_max - x_min) / max_grid_size
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new_resolution_y = (y_max - y_min) / max_grid_size
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spatial_resolution = max(new_resolution_x, new_resolution_y, spatial_resolution)
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step_x = int(np.ceil((x_max - x_min) / spatial_resolution)) + 1
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step_y = int(np.ceil((y_max - y_min) / spatial_resolution)) + 1
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print(f"调整后的空间分辨率: {spatial_resolution:.2f}, 网格尺寸: {step_x}x{step_y}")
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# 创建网格
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grid_x = np.linspace(x_min, x_max, step_x)
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grid_y = np.linspace(y_min, y_max, step_y)
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return grid_x, grid_y, step_x, step_y
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@timeit
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def interpolate(self, x: np.ndarray, y: np.ndarray, z: np.ndarray,
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spatial_resolution: float = 1.0,
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output_path: Optional[str] = None,
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proj: Optional[str] = None) -> Optional[np.ndarray]:
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"""
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执行克里金插值
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Args:
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x: X坐标数组
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y: Y坐标数组
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z: 观测值数组
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spatial_resolution: 空间分辨率
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output_path: 输出文件路径
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proj: 投影信息
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Returns:
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插值结果数组，失败时返回None
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"""
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try:
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from pykrige.ok import OrdinaryKriging
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except ImportError:
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print("错误：未安装pykrige库，请运行 'pip install pykrige'")
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return None
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# 验证输入数据
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x, y, z, is_valid = self.validate_input_data(x, y, z)
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if not is_valid:
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return None
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print(f"开始克里金插值，数据点数: {len(x)}")
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# 创建插值网格
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grid_x, grid_y, step_x, step_y = self.create_interpolation_grid(x, y, spatial_resolution)
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print(f"插值网格尺寸: {step_x} x {step_y}")
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print(f"空间范围: X=[{grid_x[0]:.2f}, {grid_x[-1]:.2f}], Y=[{grid_y[0]:.2f}, {grid_y[-1]:.2f}]")
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# 尝试不同的变差函数模型
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z_interpolated = None
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successful_model = None
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for model in self.variogram_models:
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try:
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print(f"尝试使用 {model} 变差函数模型...")
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# 动态设置参数
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nlags = min(20, max(6, len(x) // 3))
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n_closest_points = min(12, max(4, len(x) // 2))
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OK = OrdinaryKriging(
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x, y, z,
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variogram_model=model,
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verbose=False,
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enable_plotting=False,
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coordinates_type="euclidean",
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nlags=nlags
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)
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start_time = time.perf_counter()
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z_interpolated, ss = OK.execute(
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"grid", grid_x, grid_y,
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backend="loop",
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n_closest_points=n_closest_points
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)
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end_time = time.perf_counter()
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successful_model = model
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self.last_used_model = model
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print(f"使用 {model} 模型插值成功，耗时: {end_time - start_time:.2f}秒")
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break
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except Exception as e:
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print(f"模型 {model} 失败: {str(e)}")
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continue
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if z_interpolated is None:
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print("错误：所有变差函数模型均失败，无法完成插值")
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return None
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# 检查插值结果
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if np.all(np.isnan(z_interpolated)):
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print("警告：插值结果全为NaN值")
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return None
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nan_count = np.sum(np.isnan(z_interpolated))
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total_count = z_interpolated.size
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nan_percentage = (nan_count / total_count) * 100
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print(f"插值完成，使用模型: {successful_model}")
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print(f"结果统计: 总像元数={total_count}, NaN像元数={nan_count} ({nan_percentage:.1f}%)")
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print(f"数值范围: [{np.nanmin(z_interpolated):.3f}, {np.nanmax(z_interpolated):.3f}]")
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# 保存结果
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if output_path and proj:
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success = self.save_raster(z_interpolated, grid_x, grid_y, spatial_resolution, proj, output_path)
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if success:
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print(f"结果已保存至: {output_path}")
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else:
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print(f"保存失败: {output_path}")
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return z_interpolated
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def save_raster(self, data: np.ndarray, grid_x: np.ndarray, grid_y: np.ndarray,
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spatial_resolution: float, proj: str, output_path: str) -> bool:
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"""
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保存插值结果为栅格文件
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Args:
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data: 插值结果数组
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grid_x: X方向网格
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grid_y: Y方向网格
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spatial_resolution: 空间分辨率
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proj: 投影信息
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output_path: 输出路径
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Returns:
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是否保存成功
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"""
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try:
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# 确保输出目录存在
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os.makedirs(os.path.dirname(output_path), exist_ok=True)
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# 创建GDAL数据集
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driver = gdal.GetDriverByName("GTiff")
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step_x, step_y = data.shape[1], data.shape[0]
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dataset = driver.Create(
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output_path, step_x, step_y, 1, gdal.GDT_Float64,
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options=["COMPRESS=LZW", "TILED=YES"]
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)
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if dataset is None:
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print(f"错误：无法创建输出文件 {output_path}")
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return False
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# 设置地理变换参数
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x_min, y_max = grid_x[0], grid_y[-1]
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geotransform = (x_min, spatial_resolution, 0, y_max, 0, -spatial_resolution)
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dataset.SetGeoTransform(geotransform)
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# 设置投影
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dataset.SetProjection(proj)
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# 写入数据
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band = dataset.GetRasterBand(1)
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band.WriteArray(data)
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band.SetNoDataValue(np.nan)
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# 计算统计信息
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band.ComputeStatistics(0)
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# 清理资源
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band.FlushCache()
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dataset.FlushCache()
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del dataset
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return True
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except Exception as e:
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print(f"保存栅格文件时出错: {str(e)}")
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return False
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# 保持向后兼容性的函数接口
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@timeit
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def interpolate_kriging_pykrige(x, y, z, proj, spatial_resolution, output_path=None):
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"""
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执行克里金插值（向后兼容接口）
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Args:
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x: X坐标数组
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y: Y坐标数组
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z: 观测值数组
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proj: 投影信息
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spatial_resolution: 空间分辨率
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output_path: 输出路径
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Returns:
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插值结果数组
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"""
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interpolator = KrigingInterpolator()
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return interpolator.interpolate(x, y, z, spatial_resolution, output_path, proj)
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def batch_kriging_interpolation(input_folder: str, ref_img_path: str,
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output_folder: str, spatial_resolution: float = 1.0,
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file_pattern: str = "*.csv") -> None:
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"""
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批量克里金插值处理
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Args:
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input_folder: 输入CSV文件夹路径
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ref_img_path: 参考影像路径（用于获取投影信息）
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output_folder: 输出文件夹路径
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spatial_resolution: 空间分辨率
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file_pattern: 文件匹配模式
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"""
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# 验证输入路径
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if not os.path.exists(input_folder):
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raise FileNotFoundError(f"输入文件夹不存在: {input_folder}")
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if not os.path.exists(ref_img_path):
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raise FileNotFoundError(f"参考影像不存在: {ref_img_path}")
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# 确保输出文件夹存在
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os.makedirs(output_folder, exist_ok=True)
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# 获取参考影像的投影信息
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try:
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dataset = gdal.Open(ref_img_path)
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if dataset is None:
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raise ValueError(f"无法打开参考影像: {ref_img_path}")
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im_proj = dataset.GetProjection()
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del dataset
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except Exception as e:
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print(f"获取投影信息失败: {str(e)}")
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return
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# 查找CSV文件
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csv_files = glob.glob(os.path.join(input_folder, file_pattern))
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if not csv_files:
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print(f"在 {input_folder} 中未找到匹配 {file_pattern} 的文件")
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return
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print(f"找到 {len(csv_files)} 个CSV文件待处理")
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# 创建插值器
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interpolator = KrigingInterpolator()
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successful_count = 0
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failed_count = 0
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for i, csv_path in enumerate(csv_files, 1):
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filename = os.path.basename(csv_path)
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print(f"\n[{i}/{len(csv_files)}] 处理文件: {filename}")
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try:
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# 读取CSV文件
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# 支持多种分隔符
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try:
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pos_content = np.loadtxt(csv_path, delimiter='\t')
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except ValueError:
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try:
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pos_content = np.loadtxt(csv_path, delimiter=',')
|
||||
except ValueError:
|
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pos_content = np.loadtxt(csv_path, delimiter=';')
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if pos_content.shape[1] < 3:
|
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print(f"跳过文件 {filename}：列数不足（需要至少3列：x, y, z）")
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failed_count += 1
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continue
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# 数据统计
|
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total_points = len(pos_content)
|
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nan_points = np.sum(np.isnan(pos_content[:, 2]))
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print(f"数据点统计: 总计{total_points}个, NaN值{nan_points}个")
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||||
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||||
# 构建输出路径
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base_name = os.path.splitext(filename)[0]
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output_filename = f"{base_name}_kriging.tif"
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output_path = os.path.join(output_folder, output_filename)
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# 执行插值
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result = interpolator.interpolate(
|
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pos_content[:, 0], # x
|
||||
pos_content[:, 1], # y
|
||||
pos_content[:, 2], # z
|
||||
spatial_resolution,
|
||||
output_path,
|
||||
im_proj
|
||||
)
|
||||
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||||
if result is not None:
|
||||
print(f"✓ 处理成功: {output_filename}")
|
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successful_count += 1
|
||||
else:
|
||||
print(f"✗ 处理失败: {filename}")
|
||||
failed_count += 1
|
||||
|
||||
except Exception as e:
|
||||
print(f"✗ 处理文件 {filename} 时出错: {str(e)}")
|
||||
failed_count += 1
|
||||
|
||||
# 输出总结
|
||||
print(f"\n{'='*60}")
|
||||
print(f"批量处理完成")
|
||||
print(f"成功: {successful_count} 个文件")
|
||||
print(f"失败: {failed_count} 个文件")
|
||||
print(f"输出目录: {output_folder}")
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
# 示例用法
|
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print("克里金插值模块示例")
|
||||
|
||||
# 配置参数（根据实际情况修改）
|
||||
input_folder = r"data/processed/predictions" # CSV文件夹路径
|
||||
ref_img_path = r"data/raw/reference_image.tif" # 参考影像路径
|
||||
output_folder = r"data/processed/kriging_results" # 输出文件夹路径
|
||||
spatial_resolution = 1.0 # 空间分辨率（米）
|
||||
|
||||
try:
|
||||
# 执行批量插值
|
||||
batch_kriging_interpolation(
|
||||
input_folder=input_folder,
|
||||
ref_img_path=ref_img_path,
|
||||
output_folder=output_folder,
|
||||
spatial_resolution=spatial_resolution
|
||||
)
|
||||
|
||||
except Exception as e:
|
||||
print(f"批量处理失败: {str(e)}")
|
||||
print("\n请检查以下事项:")
|
||||
print("1. 输入文件夹和参考影像路径是否正确")
|
||||
print("2. CSV文件格式是否正确（至少包含x, y, z三列）")
|
||||
print("3. 是否安装了必要的依赖库（pykrige, gdal等）")
|
||||
Reference in New Issue
Block a user